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Mono-processor jobs
PBS script:
#!/bin/bash
#PBS -q main #PBS -l walltime=00:15:00 #PBS -l select=1:ncpus=1:mem=23000mb:mpiprocs=1:ompthreads=1 #PBS -l pmem=23000mb #PBS -l place=excl #PBS -W group_list=bio echo "------------------ Work dir --------------------" echo $PBS_O_WORKDIR cd ${PBS_O_WORKDIR} echo "------------------ Job Info --------------------" echo "jobid : $PBS_JOBID" echo "jobname : $PBS_JOBNAME" echo "job type : $PBS_ENVIRONMENT" echo "submit dir : $PBS_O_WORKDIR" echo "exec dir : $PBS_JOBDIR" echo "queue : $PBS_O_QUEUE" echo "user : $PBS_O_LOGNAME" echo "threads : $OMP_NUM_THREADS" echo "------------------ $PBS_NODEFILE ---------------" cat $PBS_NODEFILE echo "------------------ Checking limits -------------" ulimit echo "------------- Loading environment --------------" … |
This script requests :
- 15 minutes walltime
- 1 chunk with 1 cpu, 23000mb of memory, 1 mpi task, 1 thread.
- Any process in the job using more than 23000mb will be killed.
- An entire node will be dedicated to this job as an exclusive placement is requested.
- It is a bio project.